CDS

Accession Number TCMCG066C04644
gbkey CDS
Protein Id XP_034580642.1
Location complement(join(1182103..1182177,1182591..1182662,1182760..1182822,1182927..1183032,1183140..1183234,1183422..1183451,1183931..1184002,1184195..1184254,1184366..1184412,1184638..1184702,1184858..1184946,1185029..1185067,1185367..1185426,1186432..1186504,1187106..1187245,1187482..1187562,1188904..1189026,1189123..1189223,1189915..1190020,1190812..1190953,1191308..1191500,1191873..1191962,1192072..1192111))
Gene LOC117843957
GeneID 117843957
Organism Setaria viridis

Protein

Length 653aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034724751.1
Definition U3 small nucleolar RNA-associated protein 25 isoform X1 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category K
Description Utp25, U3 small nucleolar RNA-associated SSU processome protein 25
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14774        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000462        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034511        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGAAGCGCAAGCCCATGCCTTCCGCCGCCTCTCGAGGAGCCAAGAGCCGGCCAAAGAGGCCAAGGTCCGGGAAGCAGGGAGCTGAGTTGCGGGAGGAGAATCCCCAACTGTCAGATCACGACGATGCAGAAACCATAGATACTGAATCTATAGCAGCGGAGGCTATTCAACATGAGAAAAAATCCAATAGGAGCGTTCAAAGCATAGCGCAGAGTGATGAAGATGACACAGAAGATGAGCACGACTCTTCTAGTGGTGATGCACCGGGGGATATGATAAACAAGGGAAATGATTGTTCTGAAGAAACAGAGACTTCATGTTCATTTGATCGTCATGTAAGCCGCATCATAACAAATGAAGAAGTCAAGGAATTGATAAAGCATAACTCTAAATTTAAATGGGAAATGCCTGCTGTGGACATTCCAAGGTCCAAATGGGTTGGAACAGGTGAAAAAATGCAGGAAGCTTGTGATGATCATCTTCATGATGTCAAAGGAAAGTTGAGTAACCATTGGAAACATACGCTTGCAGATCATTTAAATTCTCGAATGGGCTTCTTCTCTCTCTGTAATAGTTATCGTGACATAATGCATTGTAATAAGAAGCCATTTTATCAGAAAAGTAATGGTGTGGATTCCAGTATTATGGACGCATATCTTATGCATGCTTTGAATCATGTTCATAGAACACGAGATGTTGTCATTAGAAATGACGCAAAGCTTAGAAATGATGCTGACAGAGATATTTCGGATGATAACACATACCTTGATCAGGGTTTTACACGCCCAAAGGTTCTTTTCTTGTTACCACTCAAAAGTTTTGCACGGCGCATTGTGAAGAGATTGATCCAGCTTTCCCCGTTGCAACAAAAGAATGCCATGGGACAATTTAAAAAGGAGTTTGGTGAATCGGATGATGAAATGCCTGAACATAGCACGAAACCTGCAGACTTTGACCTTCTTTTTGCTGGAGATATTGATGATCACTTTCTTTTTGGCATAAAATTAACGAAGAAATCTATCAAGCTTTACAGTAACTTCTATTCTTCTGATATCATAGTTGCATCTCCTTTAGCGCTTAAACGTAAAATTGATGGAGGAGAACATGGCAAGGAGAAGGATTTTGATTTCCTATCATCAATTGAAATAGTGATTGTCGATCATGCAGATGTGATATCTATGCAGAATTGGGCACATCTGGAGGCTGTTTTTGAACAACTTAATCATTTGCCATCAAAAGAACATGGAACCAATGTGATGCGAATTAGGCCATGGTACTTGGATCAGCATGCACAGTACTATCGGCAGACAATACTGTTAAGCTCATATCTTACACCAGAGATTAATGCTTTATTTAATGGATCATGCTTCAATTATGAAGGAAAGATTAAAATGGTGACCGAGTATGCAGGTGTTCTTCCCAAAATACAACTTGAAGTGCGGCAGGTGTATGAACGGTTTGATGCATCTTCTATTGCTGGAGCTGACGATGCTCGCTTTGATTATTTCTGCAACAAGGTATATCCAAAGATTCAGGACTTGGATGAGGGTGGATTATTGCTATTTGTTAGTTCGTACTTTGAATATATTCGGATAAGCAATTTCTTAAAATCTAAGGAAGCATCTTTTTGTCGGATTGGAGAGGCTACGTCACAACAAGACATATCTCGTTCAAGACTCTGGTTTTTTGAGGGCAAGAAAAAGATCTTGCTTTATAGTGAACGATCTCACTTCTACCACCGATATAAGATCAGGGGAACAAAGCATTTGCTTATTTATTCATTGCCAGGAAGAAAAGAATTTTACCCAGAGCTTGTAAATATGCTAGGTGAATCAGAAAACCCGAAGTGCAATGTCCTTTTCTCCCGTCTAGACCTTCTTAAGTTAGAGCGGATTGTTGGGACATCTTCTGCACGAAGGTTGATTTCCTCGGACAAGAGCATGTTTGTCTTCTGCTGA
Protein:  
MGKRKPMPSAASRGAKSRPKRPRSGKQGAELREENPQLSDHDDAETIDTESIAAEAIQHEKKSNRSVQSIAQSDEDDTEDEHDSSSGDAPGDMINKGNDCSEETETSCSFDRHVSRIITNEEVKELIKHNSKFKWEMPAVDIPRSKWVGTGEKMQEACDDHLHDVKGKLSNHWKHTLADHLNSRMGFFSLCNSYRDIMHCNKKPFYQKSNGVDSSIMDAYLMHALNHVHRTRDVVIRNDAKLRNDADRDISDDNTYLDQGFTRPKVLFLLPLKSFARRIVKRLIQLSPLQQKNAMGQFKKEFGESDDEMPEHSTKPADFDLLFAGDIDDHFLFGIKLTKKSIKLYSNFYSSDIIVASPLALKRKIDGGEHGKEKDFDFLSSIEIVIVDHADVISMQNWAHLEAVFEQLNHLPSKEHGTNVMRIRPWYLDQHAQYYRQTILLSSYLTPEINALFNGSCFNYEGKIKMVTEYAGVLPKIQLEVRQVYERFDASSIAGADDARFDYFCNKVYPKIQDLDEGGLLLFVSSYFEYIRISNFLKSKEASFCRIGEATSQQDISRSRLWFFEGKKKILLYSERSHFYHRYKIRGTKHLLIYSLPGRKEFYPELVNMLGESENPKCNVLFSRLDLLKLERIVGTSSARRLISSDKSMFVFC